Publications
- Krishnan, S., Karpe, S. D., Kumar, H., Nongbri, L. B., Ramanathan, S., Grosse-Wilde, E., … & Borges, R. M. (2023). Sensing volatiles throughout the body: Geographic and tissue-specific olfactory receptor expression in the fig wasp Ceratosolen fusciceps. bioRxiv, 2023-03.
- Ueland, T., Astrup, E., Otterdal, K., Lekva, T., Janardhanan, J., Michelsen, A. E., … & Damås, J. K. (2024). CC Motif Ligand 7 (CCL7) and CC Motif Chemokine Receptor 3 (CCR3) dysregulation in patients with scrub typhus and association with mortality. The Journal of Infectious Diseases, jiae401.
- Jasna, V., Parvathi, A., Gireesh, K. T., & Pazhayamadom, D. G. (2024). Sediment bacterial diversity in the upwelling regions of Alappuzha, on the southwest coast of India.
- Singh D. Mosahari, P. V. Sharma, P. Neog K., & Bora U. (2024). Comparative Genomic and Phylogenetic Analysis of the Complete Mitochondrial Genome of Cricula trifenestrata (Helfer) Among Lepidopteran Insects. Genome, (ja).
- Rahila, K., & Vardhanan, Y. S. (2024). Comparative transcriptome profiling of two pesticides, Acephate and Chlorantraniliprole in non-targeted insect model, Drosophila melanogaster. Pesticide Biochemistry and Physiology, 106023.
- Sundaresan, A. K., Gangwar, J., Murugavel, A., Malli Mohan, G. B., & Ramakrishnan, J. (2024). Complete genome sequence, phenotypic correlation and pangenome analysis of uropathogenic Klebsiella spp. AMB Express, 14(1), 78.
- Srinivasulu, B., & Chelmala, S. (2024). Molecular diet analysis using fecal DNA metabarcoding reveals the whole and the core diet of the critically endangered Kolar leaf-nosed bat Hipposideros hypophyllus and its congeners.
- Singh, P., Sharma, S., & Kumar Rath, S. (2014). Genistein induces deleterious effects during its acute exposure in Swiss mice. BioMed research international, 2014(1), 619617.
- Bandekar, M., More, K. D., Seleyi, S. C., Ramaiah, N., Kekäläinen, J., & Akkanen, J. (2024). Comparative analysis of microbiome inhabiting oxygenated and deoxygenated habitats using V3 and V6 metabarcoding of 16S rRNA gene. Marine Environmental Research, 106615.
- Sharma, P., Singh, S., Singh, A. V., Das, K., Bhaskar, Y., Goel, I., … & Das, R. (2024). Alteration of gastric microbiota in Helicobacter pylori-infected individuals suffering from GERD, DU, and gastritis. Indian Journal of Pathology and Microbiology, 10-4103.
- Kumar, A., Kashyap, J., Mandal, S., Mishra, G., Rath, J., Rout, G. R., … & Panigrahy, M. (2024). Mechanism of action of carbon nanoparticle verified in rice: Improved water use efficiency is the key.
- Sharma, G., Kaur, B., Singh, V., Raheja, Y., Falco, M. D., Tsang, A., & Chadha, B. S. (2024). Genome and secretome insights: unravelling the lignocellulolytic potential of Myceliophthora verrucosa for enhanced hydrolysis of lignocellulosic biomass. Archives of Microbiology, 206(5), 1-18.
- Kanodia, A., Monga, R., Ilyas, M., Verma, Y., Mohapatra, S., Rao, N. S., … & Atmakuri, K. (2024). Metagenome Analysis of Cholesteatoma-associated Bacteria: A Pilot Study. Indian Journal of Otolaryngology and Head & Neck Surgery, 1-12.
- Shi, X., Sharma, S., Chmielewski, R. A., Markovic, M. J., VanEpps, J. S., & Yau, S. T. (2024). Rapid diagnosis of bloodstream infections using a culture-free phenotypic platform. Communications Medicine, 4(1), 77.
- Rout, A. K., Dixit, S., Tripathy, P. S., Rout, S. S., Parida, S. N., Parida, P. K., … & Behera, B. K. (2024). Metagenomic Landscape of sediments of river Ganga reveals Microbial Diversity, potential Plastic and Xenobiotic degradation Enzymes. Journal of Hazardous Materials, 134377.
- Song, T., Gupta, S., Sorokin, Y., Frenkel, O., Cytryn, E., & Friedman, J. (2024). A Burkholderia cenocepacia-like environmental isolate strongly inhibits the plant fungal pathogen Zymoseptoria tritici. Applied and Environmental Microbiology, e02222-23.
- Yadav, E. J., Prabhakar, Y. K., Shanmugam, G., Vijayakumar, P., Kumar, M. J., Vijayakumar, N., & Murthy, J. S. R. (2024). Whole genome characterization of Jaagsiekte Sheep Retrovirus isolated from OPA infected sheep (India) and structural assessment (In-silico) of proteins of JSRV. The Microbe, 100068.
- Nair, G. R., & Raja, S. S. (2021). Insights Into the Diversity of Terrestrial Soil Bacterial Communities Associated With Four Contrasting Köppen Climatic Zones.
- Acharya, P., Singh, U. S., Rajamannar, V., Muniaraj, M., Nayak, B., & Das, A. (2024). Genome resequencing and genome-wide polymorphisms in mosquito vectors Aedes aegypti and Aedes albopictus from south India.
- Anandan, A., Panda, S., Mahender, A., & Murugaiyan, V. (2024). Breeding Rice Variety with Suitable Plant Ideotype for Next-Generation Indian Agriculture in the Changing Climatic Conditions. In Climate Change Impacts on Soil-Plant-Atmosphere Continuum (pp. 507-528). Singapore: Springer Nature Singapore.
- Khairnar, K., & Tomar, S. S. (2024). COVID-19 genome surveillance: A geographical landscape and mutational mapping of SARS-CoV-2 variants in central India over two years. Virus Research, 344, 199365.
- Krishnaswamy, S. M., Arunachal, G., Singh, K. G., Thomson, V. S., George, P., Rao, S., & Danda, S. (2024). Investigation of mutation spectrum amongst patients with familial primary cardiomyopathy using targeted NGS in Indian population. Journal of Applied Genetics, 1-14.
- Panzade, K. P., Tribhuvan, K. U., Pawar, D. V., Jasrotia, R. S., Gaikwad, K., Dalal, M., … & Padaria, J. C. (2024). Discovering the regulators of heat stress tolerance in Ziziphus nummularia (Burm. f) wight and walk.-arn. Physiology and Molecular Biology of Plants, 1-15.
- Shikha, Pandey, D. K., Upadhyay, S., Phukan, U. J., & Shukla, R. K. (2024). Transcriptome analysis of waterlogging-induced adventitious root and control taproot of Mentha arvensis. Plant Cell Reports, 43(4), 104.
- Aswathy, C. S., Roy, C. B., Shahina, K., Vinod, M. P., & Biji, C. L. (2024). Comparative transcriptomic analysis of rubber (Hevea brasiliensis) clones differing in disease tolerance provides novel insights into the disease response associated with abnormal leaf fall disease caused by Phytophthora meadii. South African Journal of Botany, 168, 130-150.
- Qian, Z., Li, Y., Pratush, A., Kan, J., Gu, J. D., Peng, T., … & Hu, Z. (2024). A comparative analysis of the microbial communities and functional genes of the nitrogen cycling in mangroves of China, Indian and Malaysia. International Biodeterioration & Biodegradation, 190, 105767.
- Sarath, P., Parveen, M., Sreekumar, V. B., Dasgupta, M., Bohra, H. R., & Dev, S. A. (2024). Genetic erosion and population decline in four threatened rattan species of India: insights from genome-wide microsatellite analysis.
- Soman, A., Pradhan, T., Krishna, R., Hermon, E. S., Somanathan, T., Jinto, E. G., … & Nair, S. A. (2024). Decoding Early-Onset of Colorectal Cancer: Insights into SERPINA3 Expression Patterns.
- Sood, C., Verma, J. K., Basak, R., Kapoor, A., Gupta, S., & Mukhopadhyay, A. (2024). Leishmania highjack host lipid body for its proliferation in macrophages by overexpressing host Rab18 and TRAPPC9 by downregulating miR-1914-3p expression. Plos Pathogens, 20(2), e1012024.
- Golender, N., & Hoffmann, B. (2024). The Molecular Epidemiology of Epizootic Hemorrhagic Disease Viruses Identified in Israel between 2015 and 2023. Epidemiologia, 5(1), 90-105.
- Arun, T. S., & Saxena, V. K. (2024). Comparative metagenomic analysis of gut microbial diversity of Indian native chicken (CARI Nirbheek) under different systems of management using NGS.
- Yadav, P., Das, J., Sundharam, S. S., & Krishnamurthi, S. (2024). Analysis of Culturable Bacterial Diversity of Pangong Tso Lake via a 16S rRNA Tag Sequencing Approach. Microorganisms, 12(2), 397.
- Kumar, A., Manasa S, L., Kashyap, J., Mandal, S., Mishra, G., Rath, J., … & Panigrahy, M. (2024). Carbon nanoparticle exposure strengthens water-relation parameters by stimulating abscisic acid pathway and aquaporins genes in rice. bioRxiv, 2024-02.
- Rout, A. K., Tripathy, P. S., Dixit, S., Behera, D. U., Behera, B., Das, B. K., & Behera, B. K. (2024). Metagenomics analysis of sediments of river Ganga, India for bacterial diversity, functional genomics, antibiotic resistant genes and virulence factors. Current Research in Biotechnology, 100187. (PDF)
- Sahoo, S., Behera, M. R., Mishra, B., Kar, S., Sahoo, P., Sahoo, N., & Biswal, S. (2024). Microbial Diversity and Resistome in Milk of Cows with Subclinical Mastitis in a Coastal District of Odisha, India. Indian Journal of Microbiology, 1-10.
- Rout, A. K., Tripathy, P. S., Dixit, S., Behera, D. U., Behera, B., Das, B. K., & Behera, B. K. (2024). Metagenomics analysis of sediments of river Ganga, India for bacterial diversity, functional genomics, antibiotic resistant genes and virulence factors. Current Research in Biotechnology, 100187.
- Ramaswamy, P., Athira, S. V., Misra, P., Chauhan, V. S., Adhvaryu, A., Gupta, A., … & Sibin, M. K. (2024). Circulating microRNA profiling identifies microRNAs linked to prediabetes associated with alcohol dependence syndrome. Alcohol.
- Majumdar, A., Upadhyay, M. K., Giri, B., Yadav, P., Moulick, D., Sarkar, S., … & Roychowdhury, T. (2024). Sustainable water management in rice cultivation reduces arsenic contamination, increases productivity, microbial molecular response, and profitability. Journal of Hazardous Materials, 133610.
- Nathar, S., Rajmichael, R., Jeyaraj Pandian, C., Nagarajan, H., Mathimaran, A., Kingsley, J. D., & Jeyaraman, J. (2024). Exploring Nocardia’s ecological spectrum and novel therapeutic frontiers through whole-genome sequencing: unraveling drug resistance and virulence factors. Archives of Microbiology, 206(2), 76.
- Choudhury, S., Anne, A., Singh, M., Chaillet, J. R., & Mohan, K. N. (2024). DNMT1 Y495C mutation interferes with maintenance methylation of imprinting control regions. The International Journal of Biochemistry & Cell Biology, 106535.
- Qian, C., & Guo, Q. (2024). Divergent Characteristics of Biomedical Research across Publication Types: A Quantitative Analysis on the Aging-related Research. arXiv preprint arXiv:2401.04323.
- Thulasiram, H. V., Karegaonkar, S. J., Sharma, P., Kumar, A., Ramkumar, S., & Pandreka, A. (2024). Targeted metabolite profiling and de novo transcriptome sequencing reveal the key terpene synthase genes in medicinally important plant, Couroupita guianensis Aubl. Plant Genetic Resources, 1-13.
- Augustine, L., Varghese, L., Kappachery, S., Ramaswami, V. M., Surendrababu, S. P., Sakuntala, M., & Thomas, G. (2024). Comparative analyses reveal a phenylalanine ammonia lyase dependent and salicylic acid mediated host resistance in Zingiber zerumbet against the necrotrophic soft rot pathogen Pythium myriotylum. Plant Science, 111972.
- Arun, T. S., Saxena, V. K., & Vineetha, P. G. (2023). Metagenomic analysis of intestinal microbiome of Indian male line broiler reared under different management systems.
- Gangopadhayya, A., Lole, K., Ghuge, O., Ramdasi, A., Kamble, A., Roy, D., … & Cherian, S. S. (2023). Metagenomic Analysis of Viromes of Aedes Mosquitoes across India.
- Kunte, P., Barberio, M., Tiwari, P., Sukla, K., Harmon, B., Epstein, S., … & Yajnik, C. (2023). Neonatal adiposity is associated with microRNAs in adipocyte-derived extracellular vesicles in maternal and cord blood, a discovery analysis. International Journal of Obesity, 1-11.
- Vishwakarma, G., Saini, A., Bhardwaj, S. C., Kumar, S., & Das, B. K. (2023). Comparative transcriptomics of stem rust resistance in wheat NILs mediated by Sr24 rust resistance gene. Plos one, 18(12), e0295202.
- Singh, I., Pathak, V. K., Lavania, M., Ahuja, M., Sharma, R., Narang, T., … & Sengupta, U. (2023). Genomic characterization of Mycobacterium lepromatosis from ENL patients from India. Infection, Genetics and Evolution, 105537.
- Kumari, K., Aggarwal, Y., & Singh, R. P. (2023). Molecular characterization and in-depth genomic analysis to unravel the pathogenic features of an environmental isolate Enterobacter sp. S-33. International Microbiology, 1-16.
- Karyakarte, R. P., Das, R., Joshi, S., Jayaram, A., Yanamandra, S., Shende, S., … & Jadhav Sr, M. G. (2023). Genomic Characterization of an Emerging SARS-CoV-2 Variant During the Early Second Wave of the SARS-CoV-2 Pandemic in Maharashtra, India. Cureus, 15(11).
- Mishra, L. K., & Shashidhar, R. (2023). Absence of Nitrogen regulatory protein C affects the growth physiology of Salmonella Typhimurium by limiting glucose transport in the cell.
- Yadav, P., Sharma, K., Tiwari, N., Saxena, G., Asif, M. H., Singh, S., & Kumar, M. (2023). Comprehensive transcriptome analyses of Fusarium-infected root xylem tissues to decipher genes involved in chickpea wilt resistance. 3 Biotech, 13(12), 390.
- Kannoth, S., Ali, N., Prasanth, G. K., Arvind, K., Mohany, M., Hembrom, P. S., … & Grace, T. (2023). Transcriptome analysis of Corvus splendens reveals a repertoire of antimicrobial peptides. Scientific Reports, 13, 18728.
- Bhargav, P., Chaurasia, S., Kumar, A., Srivastava, G., Pant, Y., Chanotiya, C. S., & Ghosh, S. (2023). Unraveling the terpene synthase family and characterization of BsTPS2 contributing to (S)-(+)-linalool biosynthesis in Boswellia. Plant Molecular Biology, 1-18.
- Prasanna, J. A., Mandal, V. K., Kumar, D., Chakraborty, N., & Raghuram, N. (2023). Nitrate-responsive transcriptome analysis of rice RGA1 mutant reveals the role of G-protein alpha subunit in negative regulation of nitrogen-sensitivity and use efficiency. Plant Cell Reports, 1-24.
- Singh, P., Bajpai, P., Maheshwari, D., Chawla, Y. M., Saini, K., Reddy, E. S., … & Chandele, A. (2023). Functional and transcriptional heterogeneity within the massively expanding HLADR+ CD38+ CD8 T cell population in acute febrile dengue patients. Journal of Virology, e00746-23.
- Sharma, P. V., Jain, S., & Sen, R. (2023). Peptides designed from a bacteriophage capsid protein function as synthetic transcription repressors. Journal of Biological Chemistry, 105373.
- Bhanothu, V., Fernandes, S., Rao, S. C., Keshwani, R., Shagun, S. W., Surve, S., … & Sriwas, S. (2023). Use of Allele-Specific-Amplification Refractory Mutation System–Polymerase Chain Reaction for the Detection of Thyroid-Stimulating Hormone Receptor Gene Mutation in an Indian Family with Thyroid Dyshormonogenesis. Annals of Neonatology.
- Bera, I., Nidhin, I. K., Hembrom, M. E., Das, K., & Chattopadhyay, I. (2023). Metagenomics offers insights into the rhizospheric bacterial diversity of mushrooms from a tropical forest and temperate forest of India. Ecological Genetics and Genomics, 100203.
- Gupta, K., Chakrabarti, S., Janardan, V., Gogia, N., Banerjee, S., Srinivas, S., … & Visweswariah, S. S. (2023). Neuronal expression in Drosophila of an evolutionarily conserved metallophosphodiesterase reveals pleiotropic roles in longevity and odorant response. PLoS genetics, 19(9), e1010962.
- Misra, G., & Joshi‐Saha, A. (2023). Genetic mapping and transcriptome profiling of a chickpea (Cicer arietinum L.) mutant identifies a novel locus (CaEl) regulating organ size and early vigor. The Plant Journal.
- Goel, N., Zaidi, S., & Khare, S. K. (2023). Whole genome sequencing and functional analysis of a novel biofilm-eradicating strain Nocardiopsis lucentensis EMB25. World Journal of Microbiology and Biotechnology, 39(11), 292.
- Irit, N., Hana, B., Laura, R., Arielle, K., Mariela, P., Esti, K. W., … & Ariel, K. (2023). Trichocoleus desertorum isolated from Negev desert petroglyphs: Characterization, adaptation and bioerosion potential. Science of The Total Environment, 904, 166739.
- Sengupta, S., Singh, N., Paul, A., Datta, D., Chatterjee, D., Mukherjee, S., … & Maji, S. K. (2023). p53 amyloid pathology with cancer grades and p53 mutations. bioRxiv, 2023-07.
- Singh, D., Pal, S., Subramanian, S., & Manickam, N. (2023). Comparative genomic analysis of a multidrug-resistant ExPEC strain IITR156 isolated from the confluence of three Indian rivers. Journal of Hazardous Materials Advances, 100364.
- Putty, K., Rao, P. L., Ganji, V. K., Dutta, D., Mondal, S., Hegde, N. R., … & Subbiah, M. (2023). First complete genome sequence of lumpy skin disease virus directly from a clinical sample in South India. Virus Genes, 59(2), 317-322.
- Senthilkumar, K. M., Sarvanan, R., Ravi, V., & Gutam, S. (2023). Transcriptome analysis and identification of leaf, tuberous root and fibrous root tissue-specific high temperature stress-responsive genes in sweet potato. J. Hortic. Sci, 18(1), 53-59.
- Kaushik, A., Metkari, S. M., Ali, S., & Bhartiya, D. (2023). Preventing/Reversing Adverse Effects of Endocrine Disruption on Mouse Testes by Normalizing Tissue Resident VSELs. Stem Cell Reviews and Reports, 1-16.
- Banu, M. S. A., Huda, K. M. K., Harun-Ur-Rashid, M., Parveen, S., Shahinul Islam, S. M., & Tuteja, N. (2023). Phenotypic and microarray analysis reveals salinity stress-induced oxidative tolerance in transgenic rice expressing a DEAD-box RNA helicase, OsDB10. Plant Molecular Biology, 1-14.
- Ulaganathan, K., Puranam, K., Mukta, S., & Hanumanth, S. R. (2023). Expression profiling of luminal B breast tumor in Indian women. Journal of Cancer Research and Clinical Oncology, 1-20.
- Ray, A., Pradhan, D., Arora, R., Siraj, F., & Rastogi, S. (2023). Microarray profiling of serum micro-RNAs in women with Chlamydia trachomatis-associated recurrent spontaneous abortion: A case control study. Microbial Pathogenesis, 106273.
- David, D., Asiku, J., Storm, N., Lapin, K., Berkowitz, A., Kovtunenko, A., … & Sol, A. (2023). Identification, Isolation, and Molecular Characterization of Betacoronavirus in Oryx leucoryx. Microbiology Spectrum, e04848-22.
- Roques, S., Koning, L., van Riel, J., Bossers, A., Schokker, D., Kar, S. K., & Sebek, L. (2023). Influence of agroecology practices on rumen microbiota associated with methane emission in dairy cattle. Animal Feed Science and Technology, 115716.
- Menon, T., & Kalyanaraman, S. (2023). The oral microbiota in patients undergoing coronary artery bypass graft surgery. Indian Journal of Thoracic and Cardiovascular Surgery, 1-4.
- MANN, A., Kumar, N., Lata, C., Kumar, A., Meena, B. L., & Kumar, A. (2023). Physiological and differential gene expression reveals a trade‐off between antioxidant capacity and salt tolerance in halophytes Urochondra setulosa and Dichanthium annulatum.
- Majeed, M., Nagabhushanam, K., Mundkur, L., Paulose, S., Divakar, H., Rao, S., & Arumugam, S. (2023). Probiotic modulation of gut microbiota by Bacillus coagulans MTCC 5856 in healthy subjects: A randomized, double-blind, placebo-control study. Medicine, 102(20).
- Majumdar, A., Dubey, P. K., Giri, B., Moulick, D., Srivastava, A. K., Roychowdhury, T., … & Jaiswal, M. K. (2023). Combined effects of dry-wet irrigation, redox changes and microbial diversity on soil nutrient bioavailability in the rice field. Soil and Tillage Research, 232, 105752.
- Maurya, R., Yadav, P., Krishna, R., Kulkarni, P., Rastogi, S., Mohapatra, S., … & Shasany, A. K. (2023). Transcriptome and metabolome analysis of sesquiterpene diversity in Indian vetiver (Chrysopogon zizanioides L. Roberty). Industrial Crops and Products, 200, 116798.
- Gunamalai, L., Duanis-Assaf, D., Maurer, D., Sharir, T., Feigenberg, O., Sela, N., & Alkan, N. (2023). Comparative characterization of virulent and less virulent Lasiodiplodia theobromae isolates. Molecular Plant-Microbe Interactions, (ja).
- Jatan, R., Kamboj, R., Kumar, M., Kumar, N., Jain, P., Lata, C., … & Bisht, D. S. (2023). Isolation and whole genome sequencing of Pseudomonas aeruginosa strain RK1 and its biocontrol potential against phytopathogens of rice. Biologia, 1-13.
- Mehta, P., Datta, D., Dahiya, P., & Mazumder, S. (2023). miR-155-Induced Activation of Pro-Inflammatory Stat1/TBX21 Pathway and M1-Signature Genes Incite Macrophage Apoptosis and Clearance of Mycobacterium fortuitum in Zebrafish. Microbiology Research, 14(2), 559-579.
- Hussain, S. S., Kumari, N., Arora, T., & Muralidhar, K. Gonadotropic Regulation of Ovarian Ascorbic Acid-New Insights.
- Sharma, P., Singh, S., Das, K., Mahant, S., & Das, R. (2023). Dysbiosis of gut microbiota due to diet, alcohol intake, body mass index, and gastrointestinal diseases in India. Applied Microbiology and Biotechnology, 107(7-8), 2547-2560.
- Balachandran, K. R. S., Sankara Subramanianan, S. H., Dhassiah, M. P., Rengarajan, A., Chandrasekaran, M., Rangamaran, V. R., & Gopal, D. (2023). Microbial community structure and exploration of bioremediation enzymes: functional metagenomics insight into Arabian Sea sediments. Molecular Genetics and Genomics, 298(3), 627-651.
- Kalaiyarasu, S., Mishra, N., Subramaniam, S., Moorthy, D., Sudhakar, S. B., Singh, V. P., & Sanyal, A. (2023). Whole-Genome-Sequence-Based Evolutionary Analyses of HoBi-like Pestiviruses Reveal Insights into Their Origin and Evolutionary History. Viruses, 15(3), 733.
- Goel, A., Aggarwal, N., Kapoor, G., Chopra, H., Naagar, M., Gangwar, A., … & Dhama, K. (2023). Skin and Soft Tissue Infections: Current Advancement in Epidemiology, Pathogenesis and Management. Journal of Pure & Applied Microbiology, 17(1).
- Natarajan, V. T., Subramaniam, Y., Sharma, B., Aggarwal, A., Raja, D. A., Gupta, I., … & Sivasubbu, S. (2023). Migration and establishment of progenitor pool of melanocytes is governed by SEMA3E-PLXND1 signaling. bioRxiv, 2023-02.
- Krishnan, S., Karpe, S. D., Hithesh, C. K., Nongbri, L. B., Sowdhamini, R., Grosse-Wilde, E., … & Borges, R. M. (2023). Sensing volatiles throughout the body: Geographic and tissue-specific olfactory receptor expression in the fig wasp Ceratosolen fusciceps. bioRxiv, 2023-03.
- da Silva, K., Date, K., Hirani, N., LeBoa, C., Jayaprasad, N., Borhade, P., … & Andrews, J. R. (2023). Population structure and antimicrobial resistance patterns of Salmonella Typhi and Paratyphi A amid a phased municipal vaccination campaign in Navi Mumbai, India. medRxiv, 2023-02.
- Ravikumar, S., Tamboli, E., Rahangdale, S., Salsekar, L., Tomar, S. S., & Khairnar, K. (2023). Dynamics of Influenza A and SARS-CoV-2 coinfections during the COVID-19 pandemic in India. medRxiv, 2023-02.
- Dixit, S., Chandrashekar, K., Upadhyay, S. K., & Verma, P. C. (2023). Transcriptional plasticity and cell wall characterization in high-methanol-producing transgenic tobacco plants. Agriculture, 13(3), 521.
- Saini, H., Dave, R., Chatterjee, S., Mandloi, A., Sharma, H., Daiya, A., … & Chowdhury, S. (2023). Transcriptomic analysis reveals differential adaptation of colorectal cancer cells to low and acute doses of cisplatin. Gene, 864, 147304.
- Verma, P., Yevate, S., E, J. S., & Parte, P. (2023). Upregulation of Profilin 2 on HDAC6 overexpression in mouse GC-1 cells and its putative role in germ cell migration in the testis. Cell and Tissue Research, 1-13.
- Sujitha, D., Kumar, H. J., Thapliayal, G., Pal, G., Vanitha, P. A., Uttarkar, A., … & Vemanna, R. S. (2023). Transcription factors controlling the expression of oxidative stress associated genes in rice (Oryza sativa L.). Plant Biotechnology Reports, 1-17.
- Jayasekera, L. P., Ranasinghe, R., Senathilake, K. S., Kotelawala, J. T., de Silva, K., Abeygunasekara, P. H., … & Tennekoon, K. H. (2023). Mitochondrial genome in sporadic breast cancer: A case control study and a proteomic analysis in a Sinhalese cohort from Sri Lanka. Plos one, 18(2), e0281620.
- Singh, N., Patel, K., Navalkar, A., Kadu, P., Datta, D., Chatterjee, D., … & Maji, S. K. (2023). Amyloid fibril-based thixotropic hydrogels for modeling of tumor spheroids in vitro. Biomaterials, 295, 122032.
- Golender, N., Klement, E., Kovtunenko, A., Even-Tov, B., Zamir, L., Tiomkin, E., … & Hoffmann, B. (2023). Comparative Molecular and Epidemiological Analyses of Israeli Bluetongue Viruses Serotype 1 and 9 Causing Outbreaks in 2018–2020. Microorganisms, 11(2), 366.
- Panda, S., Singh, P. K., Mishra, S., Mitra, S., Pattnaik, P., Adhikary, S. D., & Mohapatra, R. K. (2023). Indian Biosimilars and Vaccines at Crossroads–Replicating the Success of Pharmagenerics. Vaccines 2023, 11, 110.
- Pegu, S. R., Das, P. J., Sonowal, J., Sengar, G. S., Deb, R., Yadav, A. K., … & Gupta, V. K. (2023). Japanese Encephalitis Virus Genotype III Strains Detection and Genome Sequencing from Indian Pig and Mosquito Vector. Vaccines, 11(1), 150.
- Panda, S., Singh, P. K., Mishra, S., Mitra, S., Pattnaik, P., Adhikary, S. D., & Mohapatra, R. K. (2023). Indian Biosimilars and Vaccines at Crossroads–Replicating the Success of Pharmagenerics. Vaccines, 11(1), 110.
- Pegu, S. R., Das, P. J., Sonowal, J., Sengar, G. S., Deb, R., Yadav, A. K., … & Gupta, V. K. (2023). Japanese Encephalitis Virus Genotype III Strains Detection and Genome Sequencing from Indian Pig and Mosquito Vector. Vaccines, 11(1), 150.
- Panda, S., Singh, P. K., Mishra, S., Mitra, S., Pattnaik, P., Adhikary, S. D., & Mohapatra, R. K. (2023). Indian Biosimilars and Vaccines at Crossroads–Replicating the Success of Pharmagenerics. Vaccines, 11(1), 110.
- Kolathur, K. K., Sharma, P., Kadam, N. Y., Shahi, N., Nishitha, A., Babu, K., & Mishra, S. K. (2023). The ubiquitin‐like protein Hub1/UBL‐5 functions in pre‐mRNA splicing in Caenorhabditis elegans. FEBS letters, 597(3), 448-457.
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- Vijayakumar M. Malathi, Ravi P. More, et al., Gut Bacterial Diversity of Insecticide-Susceptible and -Resistant Nymphs of the Brown Planthopper Nilaparvata lugens Stål (Hemiptera: Delphacidae) and Elucidation of Their Putative Functional Roles Journal of microbial Biotechnology, 2018
- Curcumin induced oxidative stress causes autophagy and apoptosis in bovine leucocytes transformed by Theileria annulata Prasanna Babu Araveti & Anand Srivastava
- A prospective radomized,double-blind,placebo-controlled,dose-response relationship study to investigate efficacy of fructo-oligosaccharides on human gut microflora
- miR828 and miR858 regulate VvMYB114 to promote anthocyanin and flavonol accumulation in grapes
- De novo assembly of the Indian blue peacock(Pavo Cristatus) genome using Oxford Nanopore Technology and Illumina Sequencing
- Thiagarajan Y, Ashok kumar R, Sivakumaran T.S, Comparative study on Performance of graphite and Carbon Nano Tubes (CNT) coated SSM electrodes in cow dung slurry-fed Microbial fuel cell.
- KMT1 family methyltransferases regulate heterochromatin–nuclear periphery tethering via histone and non-histone protein methylation Publication: EMBO Reports (2019) Authors: Radhika Arasala Rao , Alhad Ashok Ketkar, Neelam Kedia, Vignesh K Krishnamoorthy, Vairavan Lakshmanan, Pankaj Kumar , Abhishek Mohanty , Shilpa Dilip Kumar , Sufi O Raja , Akash Gulyani , Chandra Prakash Chaturvedi , Marjorie Brand ,Dasaradhi Palakodeti & Shravanti Rampalli February 12, 2019
- Transcriptome profiling reveals genetic basis of disease resistance against Corynespora cassiicola in rubber tree (Hevea brasiliensis) Publication: Current Plant Biology Publisher: Elsevier. February 24, 2019
- Circular RNA Profiling by Illumina Sequencing via Template-Dependent Multiple Displacement Amplification Authors: Ashirbad Guria,Kavitha Velayudha Vimala Kumar,1 Nagesh Srikakulam, Anakha Krishnamma,Saibal Chanda, Satyam Sharma,Xiaofeng Fan, and Gopal Pandi, Journal: BioMed Research International
Volume 2019, Article ID 2756516, 12 pages
January 28, 2019
- Next-Generation Sequencing Reveals the Role of Epigallocatechin-3-Gallate in Regulating Putative Novel and Known microRNAs Which Target the MAPK Pathway in Non-Small-Cell Lung Cancer A549 Cells Authors: Vaishali Bhardwaj and Abul Kalam Azad Mandal Journal: Molecules 2019
- Genome‐wide analysis reveals miR‐3184‐5p and miR‐181c‐3p as a critical regulator for adipocytes‐associated breast cancer Authors: Dheeran Rajarajan Sweetha Selvarajan Mamilla R. Charan Raja Santanu Kar Mahapatra Ravi Kasiappan January 17, 2019 Publication: PNAS
- A SIR-independent role for cohesin in subtelomeric silencing and organization Authors: Deepash Kothiwala and Shikha Lalorayaa Publication: PNAS, January 17, 2019
- Identification and expression profiling of miRNAs in two color variants of carrot (Daucus carota L.) using deep sequencing
Authors:Bhavana Bhan, Archana Koul, Deepak Sharma, Malik Muzafar Manzoor, Sanjana Kaul, Suphla Gupta, Manoj K. Dhar
Publication: Plos One
March 7, 2019
- Whole chloroplast genome and gene locus phylogenies reveal the taxonomic placement and relationship of Tripidium (Panicoideae: Andropogoneae) to sugarcane
Authors: Dyfed Lloyd Evans, Shailesh V. Joshi and Jianping Wang Journal: BMC Evolutionary Biology2019 19:33
- Prophage-Driven Genomic Structural Changes Promote Bartonella Vertical Evolution
Ricardo G., Barak M., et al., Genome Biology and Evolution, Volume 10, Issue 11, November 2018, Pages 3089–3103
- Identification and characterization of miRNA transcriptome in Jatropha curcas by high-throughput sequencing VN Prakash, VJ Jadeja Plant gene, 2018 – Elsevier
- Evidence for up and down regulation of 450 genes by rpoB12 (rif) mutation and their implications in complexity of transcription modulation in Escherichia coliS Meenakshi, MH Munavar Microbiological research, 2018 – Elsevier
- A Splicing-Independent Function of RBM10 Controls Specific 3′ UTR Processing to Regulate Cardiac Hypertrophy, Cell Reports, Volume 24, Issue 13, September 2018, Pages 3539-3553 Nimmy Mohan, Vikas Kumar, Divya T. Kandala, Chandrasekharan C. Kartha, Rakesh S. Laishram,
- Ahmed A, Adiga V, Nayak S, Uday Kumar JAJ, Dhar C, et al. (2018) Circulating HLA-DR+CD4+ effector memory T cells resistant to CCR5 and PD-L1 mediated suppression compromise regulatory T cell function in tuberculosis. PLOS Pathogens 14(9):e1007289. https://doi.org/10.1371/journal.ppat.1007289
- Anand, Atul, Jayaramaiah, Ramesha H., Beedkar, Supriya D., Dholakia, Bhushan B., Lavhale, Santosh G., Punekar, Sachin A., Gade, Wasudeo N., Thulasiram, Hirekodathakallu V., Giri, Ashok P. Terpene profiling, transcriptome analysis and characterization of cis-β-terpineol synthase from Ocimum. Physiology and Molecular Biology of Plants. 0974-0430. October 2018. https://doi.org/10.1007/s12298-018-0612-6
- Shantanu Kundu, Vikas Kumar, Kaomud Tyagi, Rajasree Chakraborty, Iftikar Rahaman, Kailash Chandra. Complete mitochondrial genome of Indian tent turtle,Pangshura tentoria and comparative mitochondriomics. PeerJ Preprints. September 2018. https://doi.org/10.7287/peerj.preprints.27202v1
- Mondal, Tapan Kumar, Rawal, Hukam Chand, Chowrasia, Soni, Varshney, Deepti, Panda, Alok Kumar, Mazumdar, Abhishek, Kaur, Harmeet, Gaikwad, Kishor, Sharma, Tilak Raj, Singh, Nagendra Kumar. September 2018. Draft genome sequence of first monocot-halophytic species Oryza coarctata reveals stress-specific genes. Scientific Reports. 13698 VL. 2045-2322. https://doi.org/10.1038/s41598-018-31518-y
- Ondara Zablon Kerima, Pathappa Niranjana, Vinay Kumar B.S., Rajeshwari Ramachandrappa, Sharanappa Puttappa, Yadavalli Lalitha, Sushil K.Jalali, Chandish R.Ballal, Hirekodathakallu V.Thulasiram. De novo transcriptome analysis of the egg parasitoid Trichogramma chilonis Ishii (Hymenoptera: Trichogrammatidae): A biological control agent. Gene Reports. Volume 13, December 2018, Pages 115-129
- Sowmya Handenahally Reddy Sumanth Kumar Kambalimath Rajesh Kumar Singhal Manjunath K Chikkakariyappa Raveendran Muthurajan Mavinahalli P Rajanna Rohini Sreevathsa Amitha Mithra Sevanthi Trilochan Mohapatra Sarala Neelamraju Viswanathan Chinnuswamy S Gopal Krishnan Ashok K Singh Nagendra K Singh Rameshwar P Sharma Sreeman M Sheshshayee. Allele specific analysis of single parent backcross population identifies HOX10 transcription factor as a candidate gene regulating rice root growth. 03 September 2018. https://doi.org/10.1111/ppl.12826
- Nair, Raji R. Madiwale, Shreyas V. Saini, Deepak Kumar, August 2018. Clampdown of inflammation in aging and anticancer therapies by limiting upregulation and activation of GPCR, CXCR4. npj Aging and Mechanisms of Disease. 2056-3973. https://doi.org/10.1038/s41514-018-0028-0
- Manoharan Shankar, Anbazhagan Mageswari, Chandrasekaran Suganthi, Paramasamy Gunasekaran, Kodiveri M. Gothandam, Sivashanmugam Karthikeyan. Genome Sequence of a Moderately Halophilic Bacillus cereus Strain, TS2, Isolated from Saltern Sediments. Microbiol Res Announc Aug 2018, 7 (6) e00873-18; DOI: 10.1128/MRA.00873-18
- Vishal Singh Somvanshi, Madhura Tathode, Rohit Nandan Shukla, Uma Rao, Nematode Genome Announcement: A Draft Genome for Rice Root-Knot Nematode, Meloidogyne graminicola. Journal of Nematology. VOLUME 50 , ISSUE 2 , ISSN (Online) , DOI: 10.21307/jofnem-2018-018, September 2018. The Society of Nematologists
- Usha R. Dutta, Sudha N. Rao, Vijaya Kumar Pidugu, Vineeth V.S., Amrita Bhattacherjee, Aneek Das Bhowmik, Sathish K. Ramaswamy, Kumar Gautam Singh, Ashwin Dalal, Breakpoint mapping of a novel de novo translocation t(X;20)(q11.1;p13) by positional cloning and long read sequencing, Genomics, 2018, https://doi.org/10.1016/j.ygeno.2018.07.005.
- Varudkar A, Ramakrishnan U. Gut microflora may facilitate adaptation to anthropic habitat: A comparative study in Rattus. Ecol Evol. 2018;8:6463–6472. https://doi.org/10.1002/ece3.4040
- Gundu H R. Cellular and Molecular Medicine Approaches to Therapy. Developments Clin Med Pathol. 1(3). DCMP.000511.2018.
- Madhu Choudhary, Parbodh C. Sharma, Hanuman S. Jat, Abhinandita Dash, Balaji Rajashekar, Andrew J. McDonald, Mangi L. Jat, Soil bacterial diversity under conservation agriculture-based cereal systems in Indo-Gangetic Plains, 3 Biotech (2018) 8: 304. https://doi.org/10.1007/s13205-018-1317-9
- Isha Pandey, Ramandeep Kaur, Amit Kumar Subudhi, P.A Boopathi, Raja C. Mugasimangalam, Sudha N. Rao, Mohammed Aiyaz, Sanjay Kochar, Dhanpat Kochar, Ashis Das, A tiling array-based comparative genomic hybridization approach to predict copy number variations between Plasmodium falciparum field isolates from the Indian Sub-continent [version 1; referees: awaiting peer review] F1000Research 2018, 7:1033 (doi: 10.12688/f1000research.14599.1)
- Suganthi C, Mageswari A, Shankar M, Gothandam KM, Karthikeyan S. 2018. Genome sequence of Bacillus vallismortis TD3, a salt-tolerant strain isolated from the sediments of a solar saltern in Tamil Nadu, India. Microbiol Resour Announc 7:e00817-18. https://doi.org/10.1128/MRA.00817-18.
- Remya Nair, Nitesh K. Khandelwal, Md. Shariq, Archana K. Redhu, Naseem A. Gaur, Shamim Shaikh, Rajendra Prasad, Identification of genome-wide binding sites of heat shock factor 1, Hsf1, under basal conditions in the human pathogenic yeast, Candida albicans, AMB Expr (2018) 8: 116. https://doi.org/10.1186/s13568-018-0647-7
- Vidya, S., Kumar, H. S. Vijay, Bhatt, R, Laxman, R. H, Ravishankar, K. V., Transcriptional profiling and genes involved in acquired thermotolerance in Banana: a non-model crop, August 2018, Scientific Reports, 10683, Volume 8IS, 2045-2322, 10.1038/s41598-018-27820-4
- Singh, S.K., Dhawan, S.S., Lal, R.K. et al. Biochemical characterization and spatio-temporal analysis of the putative l-DOPA pathway in Mucuna pruriens Planta (2018). https://doi.org/10.1007/s00425-018-2978-7
- Vishal Singh Somvanshi, Madhura Tathode, Rohit Nandan Shukla, Uma Rao, Nematode Genome Announcement: A Draft Genome for Rice Root-Knot Nematode, Meloidogyne graminicola, Journal of Nematology. VOLUME 50 , ISSN (Online) , DOI: 10.21307/jofnem-2018-018, July 2018 © 2018.© The Society of Nematologists
- Asmaa Missoum, DNA Microarray and Bioinformatics Technologies: A mini-review, Proceedings of the Nature Research Society, 2, 02010 (2018). doi: 10.11605/j.pnrs.201802010
- Sundaresan, Srivignesh, Philosoph Hadas, Sonia Ma, Chao – Jiang, Cai-Zhong, Riov, Joseph, Mugasimangalam, Raja, Kochanek, Betina, Salim, Shoshana, Reid, Michael S., Meir, Shimon, The Tomato Hybrid Proline-rich Protein regulates the abscission zone competence to respond to ethylene signals, Horticulture Research 2018, Volume 5, Issue 1, Pages 2052-7276
- Ramasamy Yasodha, Ramesh Vasudeva, Swathi Balakrishnan, Ambothi Rathnasamy Sakthi, Nicodemus Abel, Nagarajan Binai, Balaji Rajashekar, Vijay Kumar Waman Bachpai, Chandrasekhara Pillai, Suma Arun Dev; Draft genome of a high value tropical timber tree, Teak (Tectona grandis L. f): insights into SSR diversity, phylogeny and conservation, May 2018, DNA Research
- Chandreyee Datta Arijita Subuddhi Manish Kumar Thurbu Tshering Lepcha Sohini Chakraborty Kuladip Jana Zhumur Ghosh Asish Kumar Mukhopadhyay Joyoti Basu Manikuntala Kundu, Genome‐wide mRNA–miRNA profiling uncovers a role of the microRNA miR‐29b‐1‐5p/PHLPP1 signalling pathway in Helicobacter pylori‐driven matrix metalloproteinase production in gastric epithelial cells, Cellular Microbiology, May 2018
- Mohammad Rumman, Abhijit Majumder, Linda Harkness, Balu Venugopal, M.B. Vinay, Malini S. Pillai, Moustapha Kassem, Jyotsna Dhawan, Induction of quiescence (G0) in bone marrow stromal stem cells enhances their stem cell characteristics, Stem Cell Research, Volume 30, 2018, Pages 69-80, ISSN 1873-5061
- Sundaresha S., Sharma Sanjeev, Shandil Rajesh K., Sharma Sadhana, Thakur Vandana, Bhardwaj Vinay, Kaushik Surinder K., Singh Bir Pal, Chakrabarti Swarup K. (2018) An insight into the downstream analysis of RB gene in F1 RB potato lines imparting field resistance to late blight. Functional Plant Biology
- Roopali Pradhan, Devika Ranade, Kundan Sengupta; Emerin modulates spatial organization of chromosome territories in cells on softer matrices (April 2018), Nucleic Acids Research, gky288,
- Himabindu Kudapa Vanika Garg Annapurna Chitikineni Rajeev K. Varshney. (April 2018) The RNA‐Seq based high resolution gene expression atlas of chickpea (Cicer arietinum L.) reveals dynamic spatio‐temporal changes associated with growth and development. Plant Cell Environment, https://doi.org/10.1111/pce.13210
- Tandon D, Haque MM, R. S, Shaikh S, P. S, Dubey AK, et al. (2018) A snapshot of gut microbiota of an adult urban population from Western region of India. PLoS ONE 13(4):e0195643. 10.1371/journal.pone.0195643
- Genome sequence and comparative analysis of Bacillus cereus BC04, reveals genetic diversity and alterations for antimicrobial resistance. (2018) Srinivasan, V.B., Angrasan, M., Chandel, N. et al. Funct Integr Genomics (2018). Springer Berlin Heidelberg 1438-793X. https://doi.org/10.1007/s10142-018-0600-5
- Suresh H. Basagoudanavar, Madhusudan Hosamani, R. P. Tamil Selvan, B. P. Sreenivasa, Aniket Sanyal, R. Venkataramanan (April 2018). Host serum microRNA profiling during the early stage of foot-and-mouth disease virus infection. Archives of Virology pp 1–9.
- Nutan Thakur, Harish Changotra, Neelam Grover, Jitendraa Vashistt (June 2018). Elucidation of bacterial species during childhood diarrhea through 16S rRNA Illumina Miseq approach. Meta Gene, Volume 16, Pages 234-240
- S. Wajih A. Naqvi, Phyllis Lam, Gayatree Narvenkar, Amit Sarkar, Hema Naik, Anil Pratihary, Damodar M. Shenoy, Mangesh Gauns, Siby Kurian, Samir Damare, Manon Duret, Gaute Lavik & Marcel M. M. Kuypers (February 2018). Methane stimulates massive nitrogen loss from freshwater reservoirs in India. Nature Communications Article number: 1265.
- Nizar Jamal Haddad, Noureddine Adjlane, Deepti Saini, Athul Menon, Venkatesh Krishnamurthy, Devan Jonklaas J., Paul Tomkins, Wahida Loucif‐Ayad, Lisa Horth (March 2018). Whole‐genome sequencing of north African honey bee Apis mellifera intermissa to assess its beneficial traits. Entomological Research.
- Erika Salavarría, Sujay Paul, Patricia Gil‑Kodaka, Gretty K. Villena. ( April 2018). First global transcriptome analysis of brown algae Macrocystis integrifolia (Phaeophyceae) under marine intertidal conditions. 3Biotech, Vol 8:185
- Mubashshir Rasheed, Anamika Battu and Rupinder Kaur. Aspartyl proteases in Candida glabrata are required for suppression of the host innate immune response. JBC (2018)
- Vikas Yadav, Sheng Sun, R. Blake Billmyre, Bhagya C. Thimmappa, Terrance Shea, Robert Lintner, Guus Bakkeren, Christina A. Cuomo, Joseph Heitman, Kaustuv Sanyal. RNAi is a critical determinant of centromere evolution in closely related fungi. PNAS (2018)
- Shankha Subhra Chatterjee, Mayukh Biswas, Liberalis Debraj Boila, Debasis Banerjee and Amitava Sengupta. SMARCB1 Deficiency Integrates Epigenetic Signals to Oncogenic Gene Expression Program Maintenance in Human Acute Myeloid Leukemia. Molecular Cancer Resarch (2018).
- N. S. Subina, B. R. Thorat, Maria-Judith Gonsalves. Nitrification in intertidal sponge Cinachyrella cavernosa. Aquatic Ecology (2018)
- M. B. Mohamed Sathik, Lisha P. Luke, Anantharamanan Rajamani, Linu Kuruvilla, K. V. Sumesh, Molly Thomas. De novo transcriptome analysis of abiotic stress-responsive transcripts of Hevea brasiliensis. Molecular Breeding (2018).
- Divya Vashisth, Ritesh Kumar, Shubhra Rastogi, Vikas Kumar Patel, Alok Kalra, Madan Mohan Gupta, Anil Kumar Gupta & Ajit Kumar Shasany. Transcriptome changes induced by abiotic stresses in Artemisia annua. Scientific Reports (2018).
- Pankaj Kumar Singh, Sayak Ganguli, Amita Pal. Screening and Identification of putative long non coding RNAs from transcriptome data of a high yielding blackgram (Vigna mungo), Cv. T9. Data in Brief. 2018
- Crystal A. Shanley, Marcela I. Henao-Tamayo, Chand Bipin, Raja Mugasimangalam, Deepshika Verma, Diane J. Ordway, Elizabeth M. Streicher, Ian M. Orme. Biology of clinical strains of Mycobacterium tuberculosis with varying levels of transmission. Tuberculosis Journal (2018).
- Mallika Lavania, Itu Singh, Ravindra P Turankar, Anuj Kumar Gupta, Madhvi Ahuja, Vinay Pathak, and Utpal Sengupta. Enriched whole genome sequencing identified compensatory mutations in the RNA polymerase gene of rifampicin-resistant Mycobacterium leprae strains. Infection and Drug Resistance (2018).
- Lalit Kumar, Shamsuzzama, Pooja Jadiya, Rizwanul Haque, Shikha Shukla, Aamir Nazir. Functional Characterization of Novel Circular RNA Molecule, circzip-2 and Its Synthesizing Gene zip-2 in C. elegans Model of Parkinson’s Disease. Molecular Neurobiology. (2018)
- Samantha Leong, Yue Zhao, Noyal M. Joseph, Natasha S. Hochberg, Sonali Sarkar, Jane Pleskunas, David Hom, Subitha Lakshminarayanan, C. Robert Horsburgh Jr., Gautam Roy, Jerrold J. Ellner, W. Evan Johnson, Padmini Salgame. Existing blood transcriptional classifiers accurately discriminate active tuberculosis from latent infection in individuals from south India. Tuberculosis. (2018)
- Samantha Leong, Yue Zhao, Noyal M. Joseph, Natasha S. Hochberg, Sonali Sarkar, Jane Pleskunas, David Hom, Subitha Lakshminarayanan, C. Robert Horsburgh Jr., Gautam Roy, Jerrold J. Ellner, W. Evan Johnson, Padmini Salgame. Existing blood transcriptional classifiers accurately discriminate active tuberculosis from latent infection in individuals from south India. Tuberculosis. (2018)
- Singh, Garima; Roy, Jyoti; Rout, Pratiti; Mallick, Bibekanand. Genome-wide profiling of the PIWI-interacting RNA-mRNA regulatory networks in epithelial ovarian cancers. Plos One (2018)
- Sanjeev Kumar Shukla, Shubhra Shukla, Rehan Khan, Anuj Ahuja, Lakshya Veer Singh, Nitin M. Kamble, Anupam Dhasmana, Naveen Sharma, Bipin Chand, Ajay Vir Singh. Pathway analysis of differentially expressed genes in Mycobacterium bovis challenged bovine macrophages (2017)
- Ella, Krishna Murthy Kandaswamy, Sumathy Inactivated chikungunya viruses (CHIKV) comprising an E1-K211E mutation. FPO (2017)
- K. Polavarapu, , A. Nalini, S. MK, S. Narayan Rao, V. Preethish-Kumar, D. Sekar, V. Sundar, S. Vengalil, S. Nashi, V. Krishnamurthy. A next generation sequencing based mutational analysis in Duchenne and Becker muscular dystrophy. Journal of the Neurological Sciences (2017).
- Jyoti Kureel, Aijaz A. John, Ravi Prakash, Divya Singh. MiR 376c inhibits osteoblastogenesis by targeting Wnt3 and ARF-GEF-1 -facilitated augmentation of beta-catenin transactivation. Journal of Cellular Biochemistry (2017).
- Soumyadev Sarkar, Somnath Chakravorty, Avishek Mukherjee, Debanjana Bhattacharya, Semantee Bhattacharya, Ratan Gachhu. De novo RNA-Seq based transcriptome analysis of Papiliotrema laurentii strain RY1 under nitrogen starvation. Gene (2017).
- Rathinasamy Karpagam, Kalimuthu Jawaharraja, Balasubramaniem Ashokkumar, Jayavel Sridhar, Perumal Varalakshmi, Unraveling the lipid and pigment biosynthesis in Coelastrella sp. M-60: Genomics-enabled transcript profiling. Algal Research (2018).
- G Kiran Kumar Reddy, Y V Nancharaiah. Sustainable bioreduction of toxic levels of chromate in a denitrifying granular sludge reactor. Environmental Science and Pollution Research (2017).
- P.A. Sutton, P.V. Jithesh1, R.P. Jones, J.P. Evans, D. Vimalachandran, H.Z. Malik, B.K. Park, C.E. Goldring, D.H. Palmer, N.R. Kitteringham. Exome sequencing of synchronously resected primary colorectal tumours and colorectal liver metastases to inform oncosurgical management. The Journal of Cancer Surgery (2017).
- Poulomi Banerjee, Harshini Surendran, Kapil Bharti, Kaoru Morishita, Anurag Varshney, Rajarshi Pal. Long non-coding RNA RP11-380D23.2 drives distal-proximal patterning of the lung by regulating PITX2 expression. Stem Cells (2017).
- Deepika Singh, Debajyoti Kabiraj, Pragya Sharma, Hasnahana Chetia, Ponnala Vimal Mosahari, Kartik Neog, Utpal Bora. The mitochondrial genome of Muga silkworm (Antheraea assamensis) and its comparative analysis with other lepidopteran insects. PLoS ONE (2017).
- Dillon F. Da Fonte, Christopher J. Martyniuk, Lei Xing, Adrian Pelin, Nicolas Corradi, Wei Hu & Vance L. Trudeau. Secretoneurin A regulates neurogenic and inflammatory transcriptional networks in goldfish (Carassius auratus) radial glia. Nature’s Scientific Reports (2017).
- Jyoti Kode, Navin Khattry, Ashish Bakshi, Vasanti Amrutkar, Bhausaheb Bagal, Rohini Karandikar, Pallavi Rane, Nobutaka Fujii, Shubhada Chiplunkar. Study of stem cell homing & self-renewal marker gene profile of ex vivo expanded human CD34+ cells manipulated with a mixture of cytokines & stromal cell-derived factor 1. Indian Journal of Medical Research (2017).
- Tarique Anwar, Bijoya Sen, Savera Aggarwal, Rhisita Nath, Ajay Katoch, Mohamed Aiyaz, Nirupma Trehanpati, Sanjeev Khosla, Gayatri Ramakrishnan. Differentially regulated gene expression in quiescence vs. senescence and identification of ARID5A as a quiescence associated marker. Journal of Cellular physiology (2017).
- Rama Chandra Laha, Surajit De Mandal, Lalhmanghai Ralte, Laldinfeli Ralte, Nachimuthu Senthil Kumar, Guruswami Gurusubramanian, Ramalingam Satishkumar, Raja Mugasimangalam and Nagesh Aswathnarayana Kuravadi. Correction to: Meta-barcoding in combination with palynological inference is a potent diagnostic marker for honey floral composition. AMB Express (2017)
- Susheel Kumar Singh, Sunita Singh Dhawan. Analyzing trichomes and spatio-temporal expression of a cysteine protease gene Mucunain in Mucuna pruriens L. (DC). Protoplasma (2017).
- Kuppusamy Sivasankaran, Pratheesh Mathew, Sekar Anand, Stanislaus Antony Ceasar, Soosaimanikam Mariapackiam, Savarimuthu Ignacimuthu. Complete mitochondrial genome sequence of fruit-piercing moth Eudocima phalonia (Linnaeus, 1763) (Lepidoptera: Noctuoidea). Genomics Data (2017).
- Tapan Kumar Mondal, Hukam Chand Rawal, Kishor Gaikwad, Tilak Raj Sharma, Nagendra Kumar Singh. First de novo draft genome sequence of Oryza coarctata, the only halophytic species in the genus Oryza. (2017).
- Udita Chandra, Aarti Yadav, Devanand Kumar, Swati Saha. Cell cycle stage-specific transcriptional activation of cyclins mediated by HAT2- dependant H4K10 acetylation of promoters in Leishmania donovani. PLoS Pathog (2017).
- Gursharan Kaur, Vineet Kumar, Amit Arora, Ajay Tomar, Ashish, Runa Sur & Dipak Dutta. Affected energy metabolism under manganese stress governs cellular toxicity. Natures Scientific Reports (2017).
- Surender Kumar, BL Subbarao & Vipin Hallan. Molecular characterization of emaraviruses associated with Pigeonpea sterility mosaic disease. Natures Scientific Reports (2017).
- Nizar Haddad, Noureddine Adjlane, Wahida Loucif-Ayad, Abhinandita Dash, S. Naganeeswaran, Balaji Rajashekar, Kosai Ali Ahmed Al-Nakeeb, Thomas Sicheritz-Pontén. Mitochondrial genome of the North African Sahara Honeybee, Apis mellifera sahariensis (Hymenoptera: Apidae). Mitochondrial Dna Part B (2017).
- Sumit Kumar, Rachapudi Venkata Sreeharsha, Shalini Mudalkar, Prasad M. Sarashetti & Attipalli Ramachandra Reddy. Molecular insights into photosynthesis and carbohydrate metabolism in Jatropha curcas grown under elevated CO2 using transcriptome sequencing and assembly. Natures Scientific Reports (2017).
- M. Sarvajith, G. Kiran Kumar Reddy, Y.V. Nancharaiah. Textile dye biodecolourization and ammonium removal over nitrite in aerobic granular sludge sequencing batch reactors. Journal of Hazardous Materials (2017).
- Shumei Chia, Joo-Leng Low, Xiaoqian Zhang, Xue-Lin Kwang, Fui-Teen Chong, Ankur Sharma, Denis Bertrand, Shen Yon Toh, Hui-Sun Leong, Matan T. Thangavelu, Jacqueline S. G. Hwang, Kok-Hing Lim, Thakshayeni Skanthakumar, Hiang-Khoon Tan, Yan Su, Siang Hui Choo, Hannes Hentze, Iain B. H. Tan, Alexander Lezhava, Patrick Tan, Daniel S. W. Tan, Giridharan Periyasamy, Judice L. Y. Koh, N. Gopalakrishna Iyer & Ramanuj DasGupta. Phenotype-driven precision oncology as a guide for clinical decisions one patient at a time. Nature Communications (2017).
- R. V. Sreedhar, P. Prasad, L. Prasanna Anjaneya Reddy, Ram Rajasekharan & Malathi Srinivasan. Unravelling a stearidonic acid – rich triacylglycerol biosynthetic pathway in the developing seeds of Buglossoides arvensis: A transcriptomic landscape. Natures Scientific Reports (2017).
- Sana Parveen, Dhiviya Vedagiri, Hitha Gopalan Nair, Haripriya Parthasarathy, and Krishnan Harinivas Harshan. Unconventional MAPK-GSK-3β Pathway Behind Atypical Epithelial-Mesenchymal Transition In Hepatocellular Carcinoma. Natures Scientific Reports (2017).
- Dhiru Bansal, Jahnavi Kulkarni, Kavana Nadahalli, Vairavan Lakshmanan, Srikar Krishna, Vidyanand Sasidharan, Jini Geo, Shilpa Dilipkumar, Renu Pasricha, Akash Gulyani, Srikala Raghavan and Dasaradhi Palakodeti. Cytoplasmic poly (A)-binding protein critically regulates epidermal maintenance and turnover in the planarian Schmidtea mediterranea. The Company of Biologists Ltd|Development (2017).
- Abhishek Ojha, Deepak Kumar Sinha, A.P. Padmakumari, J.S. Bentur and Suresh Nair. Bacterial Community Structure in the Asian Rice Gall Midge Reveals a Varied Microbiome Rich in Proteobacteria. Nature Scientific Reports (2017)
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- Core promoter variants (A-20C, T-18C and G-6A) of the angiotensinogen (AGT) gene are not significantly associated with hypertension in patients of Tamilnadu.
- Mittal D, Chakrabarti S, Sarkar A, Singh A, Grover A. Heat shock factor gene family in rice: genomic organization and transcript expression profiling in response to high temperature, low temperature and oxidative stresses. Plant Physiol Biochem. 2009;47(9):785-95.
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- Ben-israel I, Yu G, Austin MB, et al. Multiple biochemical and morphological factors underlie the production of methylketones in tomato trichomes. Plant Physiol. 2009;151(4):1952-64.
- Transcriptional Regulation and the Role of Galactose Metabolism in the Virulence of Candida albicans
- Methylketone Biosynthesis in Tomato F2 Segregant Populations
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- The joint tissue microarray gene chips explore the molecular mechanism of the development of Barrett’s esophagus occurs, Wang Xingwei,
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- Development of Prodrug 4-Chloro-3-(5-methyl-3-{[4-(2-pyrrolidin-1-ylethoxy)phenyl]amino}-1,2,4-benzotriazin-7-yl)phenyl Benzoate (TG100801) : A Topically Administered Therapeutic Candidate in Clinical Trials for the Treatment of Age-Related Macular Degeneration.
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- Jalota-badhwar A, Kaul-ghanekar R, Mogare D, Boppana R, Paknikar KM, Chattopadhyay S. SMAR1-derived P44 peptide retains its tumor suppressor function through modulation of p53. J Biol Chem. 2007;282(13):9902-13.
- Mantelingu K, Reddy BA, Swaminathan V, et al. Specific inhibition of p300-HAT alters global gene expression and represses HIV replication. Chem Biol. 2007;14(6):645-57.
- Chattopadhyay I, Kapur S, Purkayastha J, et al. Gene expression profile of esophageal cancer in North East India by cDNA microarray analysis. World J Gastroenterol. 2007;13(9):1438-44.
- Noronha G, Barrett K, Boccia A, et al. Discovery of [7-(2,6-dichlorophenyl)-5-methylbenzo [1,2,4]triazin-3-yl]-[4-(2-pyrrolidin-1-ylethoxy)phenyl]amine–a potent, orally active Src kinase inhibitor with anti-tumor activity in preclinical assays. Bioorg Med Chem Lett. 2007;17(3):602-8.
- Targeting Drug Resistant Mutations Using Novel Binding Interactions – Lessons Learned from Abl-T315I and their Implications in Drug Design . Frontiers in Drug Design & Discovery: Structure-Based Drug Design in the 21st Century
